🧬 Computational Biology - CWhiting · Scour

iS2C2: a cointelligent platform for mechanistic discovery of disease cellular crosstalk 💻Bioinformatics

AI-derived Protein Structures Validation: AlphaFold2 Models in the Twilight Zone ⚗️Generative Chemistry

biorxiv.org·1d

Deep Learning for Protein Complex Prediction and Design 💻Bioinformatics

[ASAP] Assessment of Alphafold Protein Models for Small-Molecule Ligand Docking versus Co-Folding ⚗️Generative Chemistry

Biological AI: Building a Tool-Calling Cellular Simulation 🤖Agentic AI

dailybuild.xyz·4d·DEV

Temporal network analysis in systems biology: concepts, inference, and validation 🌐Complex Systems

frontiersin.org·3d

CVEvolve: Autonomous Algorithm Discovery for Unstructured Scientific Data Processing 🔬AI for Science

COCOA.jl: A Julia package for high-performance analysis of concordance and kinetic modules in biochemical networks 💻Bioinformatics

biorxiv.org·6d

Hierarchical Transformer Preconditioning for Interactive Physics Simulation 🎮GPU Programming

Flux sampling and graph neural networks for improved gene essentiality prediction in mammalian genome-scale metabolic models 💻Bioinformatics

Parallel-in-Time Training of Recurrent Neural Networks for Dynamical Systems Reconstruction ✨Effect Handlers

Know Your Alphabet: Conformational Noise, Latent-Space Encodings, and the Future of Structural Phylogenetics 💻Bioinformatics

biorxiv.org·5d

A nonlinear extension of parametric model embedding for dimensionality reduction in parametric shape design 🧮Vector Embeddings

A rule-based simulation model illuminates the role of asymmetric mitochondrial fission on beta-cell health ⚗️Generative Chemistry

A structural grammar of truncation across the human homodimer landscape 💻Bioinformatics

biorxiv.org·5d

Fast and effective algorithms for fair clustering at scale 🔍Proximity Search

Genetic Information as a "Chord" of Chemical Oscillations: Emergence of Catalyst-RNA Systems Driven by Superposed Rhythms ⚗️Generative Chemistry

Better Protein Function Prediction by Modeling Survivorship Bias 🎲Probabilistic Data Structures

Structure-Centric Graph Foundation Model via Geometric Bases 🗜️Graph Compression

What Will Happen Next: Large Models-Driven Deduction for Emergency Instances ✨Effect Handlers

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