🧬 Computational Biology - nmarshall · Scour

Towards protein folding pathways by reconstructing protein residue networks with a policy-driven model 🍄Mycelium Networks

arxiv.org·4d

Algorithms for Modern Hardware ⚙️Performance Profiling

en.algorithmica.org·2d·Hacker News

A Brief History of Bioinformatics Software 🍄Mycelium Networks

asimov.press·3d

New comment by cschalmers in "Ask HN: Who is hiring? (April 2026)" 🏗️Cranelift

cgrlab.github.io·6d·Hacker News

Matcha model makes drug candidate screening more than 30 times faster 🧩Constraint Programming

phys.org·3d

AI X Biology — Part 2: DNA Foundational Models 🍄Mycelium Networks

medium.com

·6d

Fitting coarse-grained models to macroscopic experimental data via automatic differentiation ⚡Incremental Computation

pnas.org·3d

SMT with Uninterpreted Functions and Monotonicity Constraints in Systems Biology 🧩Constraint Programming

arxiv.org·1d

Unavailability of experimental 3D structural data on protein folding dynamics and necessity for a new generation of structure prediction methods in this context 🐻‍❄️Polars

arxiv.org·2d

Identifying bubble-like subgraphs in linear-time via a unified SPQR-tree framework 🌸Bloom Filters

arxiv.org·1d

Five-Structures Preserving Algorithm for charge dynamics model 📐Computational Geometry

arxiv.org·1d

The limits of bio-molecular modeling with large language models 🏗️AI Infrastructure

arxiv.org·4d

GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding 📝Parser Combinators

arxiv.org·3d

Entropy, Disagreement, and the Limits of Foundation Models in Genomics 🎯Hindley-Milner

arxiv.org·4d

Choosing the Right Regularizer for Applied ML: Simulation Benchmarks of Popular Scikit-learn Regularization Frameworks 🏗️AI Infrastructure

arxiv.org·4d

Hybrid Quantum-Classical Algorithm for Hamiltonian Simulation 🔢Homomorphic Encryption

arxiv.org·3d

Generative modeling of granular flow on inclined planes using conditional flow matching 📐Computational Geometry

arxiv.org·4d

Hierarchical SVG Tokenization: Learning Compact Visual Programs for Scalable Vector Graphics Modeling 🐻‍❄️Polars

arxiv.org·3d

Polynomial and Pseudopolynomial Algorithms for Two Classes of Bin Packing Instances 📊Algorithms

arxiv.org·3d

ORION: Unifying Top-Down and Bottom-Up Chemical Space Sampling for a Universal Organic Force Field 🎮Game Engines

arxiv.org·3d