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bioRxiv: Bioinformatics Preprints
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5w
5 weeks ago
Metabolic Self-Organization: Emergence of Autonomous Agency in a Metabolically Constrained LLMs
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Actions for Metabolic Self-Organization: Emergence of Autonomous Agency in a Metabolically Constrained LLMs
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5w
5 weeks ago
Testing the mutation accumulation hypothesis in aging with AlphaGenome
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Actions for Testing the mutation accumulation hypothesis in aging with AlphaGenome
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5w
5 weeks ago
TwinSAR: An Adaptive Kernel-based Algorithm with logit-transformed Z-score Filtering for Chemical Twin Detection in Large-scale Virtual Screening
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Actions for TwinSAR: An Adaptive Kernel-based Algorithm with logit-transformed Z-score Filtering for Chemical Twin Detection in Large-scale Virtual Screening
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5w
5 weeks ago
PlantP450Dock: an Automated Molecular Docking Pipeline of Plant Cytochrome P450s
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5w
5 weeks ago
Exploring the Mechanism of Na⁺/K⁺-ATPase (NKA) and 20-HETE Ligand Interactions by in-silico modeling
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Actions for Exploring the Mechanism of Na⁺/K⁺-ATPase (NKA) and 20-HETE Ligand Interactions by in-silico modeling
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5w
5 weeks ago
simCRISPR: Modeling experimental complexity in pooled CRISPR screens
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Actions for simCRISPR: Modeling experimental complexity in pooled CRISPR screens
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5w
5 weeks ago
Benchmarking long-context genome language models on biosynthetic gene clusters
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Actions for Benchmarking long-context genome language models on biosynthetic gene clusters
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5w
5 weeks ago
Machine learning-based Personalized Dietary Recommendations to Achieve Desired Gut Microbial Compositions
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Actions for Machine learning-based Personalized Dietary Recommendations to Achieve Desired Gut Microbial Compositions
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5w
5 weeks ago
Physics-Informed Neural Networks for Parameter Recovery in the Repressilator Oscillatory Model
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Actions for Physics-Informed Neural Networks for Parameter Recovery in the Repressilator Oscillatory Model
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5w
5 weeks ago
TDP-43 regulates chromatin looping and gene transcription through binding and stabilizing DNA G-quadruplex structures
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Actions for TDP-43 regulates chromatin looping and gene transcription through binding and stabilizing DNA G-quadruplex structures
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5w
5 weeks ago
Design of DNA Aptamers for Lyme disease Diagnosis Combining experimental and numerical approaches
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Actions for Design of DNA Aptamers for Lyme disease Diagnosis Combining experimental and numerical approaches
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5w
5 weeks ago
pyKinaXe: a fast and robust turnkey kinase activity profiler with high resolution
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Actions for pyKinaXe: a fast and robust turnkey kinase activity profiler with high resolution
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5w
5 weeks ago
Deep Learning for Cross-Domain Spatial Transcriptomic Modeling of Tissue Repair
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Actions for Deep Learning for Cross-Domain Spatial Transcriptomic Modeling of Tissue Repair
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5w
5 weeks ago
TransXplorer: An automated translational discovery platform for RNA-seq data
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Actions for TransXplorer: An automated translational discovery platform for RNA-seq data
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5w
5 weeks ago
Biological foundation models illuminate annotation blind spots in evolutionarily divergent genomes
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Actions for Biological foundation models illuminate annotation blind spots in evolutionarily divergent genomes
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5w
5 weeks ago
A modular Bayesian framework for inferring transmission networks from polyclonal infections, with application to Plasmodium falciparum
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Actions for A modular Bayesian framework for inferring transmission networks from polyclonal infections, with application to Plasmodium falciparum
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5 weeks ago
The human gut virome is a non-redundant and clinically informative component of the microbiome
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Actions for The human gut virome is a non-redundant and clinically informative component of the microbiome
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5w
5 weeks ago
In Silico Structure-Based Interactomic Analysis of the Scaffolding Protein DCAF7
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Actions for In Silico Structure-Based Interactomic Analysis of the Scaffolding Protein DCAF7
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6w
6 weeks ago
DeSpotX: Identifiability-Based Decontamination for Spatial Transcriptomics
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Actions for DeSpotX: Identifiability-Based Decontamination for Spatial Transcriptomics
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6w
6 weeks ago
Benchmarking siRNA Prediction: The Role of Representation and Validation Strategies
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Actions for Benchmarking siRNA Prediction: The Role of Representation and Validation Strategies
« Page 32
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