bioRxiv: Bioinformatics Preprints · Scour

NativeReady: an open benchmark and sequence-based triage model for native mass spectrometry suitability

SNPWay: streamlined SNP-to-function and pathway over-representation analysis

Synthetic Data Generation and Nonparametric Techniques for Assessing Multivariate Similarity to Address Small-Sample Size Challenges

A vaccine for global eradication of TB - A novel conceptual framework and design of a potent peptide-based vaccine with universal coverage through advanced comp...

metaJAM: a Nextflow integrated metagenomic workflow for sedimentary ancient DNA

Solid Tumors Pan Cancer Transcriptome Tissue/Cancer specific expression groups at the Isoform-Level

ProtSpace: Protein Universe in Your Browser

Evaluating Reference-Independent Pipelines for the Detection of Spreading Organisms in Metagenomic Datasets

geneSync: Gene Symbol Harmonization for Large-scale RNA-seq Data Integration

Decoding Condition-Specific Cellular Crosstalk in Spatial Omics via Bilinear Edge Classification

Striping artifact removal in VisiumHD data through nuclear counts modeling

SLiMNet: a deep learning model to detect short linear motifs using protein large language model representations and paired inputs

Confronting spurious evaluations of computational methods in small molecule mass spectrometry

ORBIT: Orthogonal Rotation for Biological Inter-species Transfer

Image-Conditioned Diffusion for Privacy-Preserving Synthetic Medical Images

A lightweight codon-based DNA Transformer for Regulatory Region Identification in the Genome

Gene-Modulated Network Diffusion for Improved Modeling of Amyloid-β Spread in Alzheimer's Disease

BGC-QUAST: a quality assessment tool for genome mining software

Bridging genomes and peptidomes: hybrid sequencing reveals conserved bioactive peptides in crustaceans

scLASER: a robust framework for simulating and detecting time-dependent single-cell dynamics in longitudinal studies

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