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bioRxiv: Bioinformatics Preprints
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5d
5 days ago
Infectious Disease Forecasting via Physics-Informed Machine Learning
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Actions for Infectious Disease Forecasting via Physics-Informed Machine Learning
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5d
5 days ago
OmicOS: A Comprehensive Omics Ecosystem Infrastructure and Agent System for the AI Era
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Actions for OmicOS: A Comprehensive Omics Ecosystem Infrastructure and Agent System for the AI Era
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5d
5 days ago
THEOBROMA: an aggregated open database of 1.13 million natural products with per-compound license auditing, three-tier classification, and stereochemistry-aware...
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Actions for THEOBROMA: an aggregated open database of 1.13 million natural products with per-compound license auditing, three-tier classification, and stereochemistry-aware...
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5d
5 days ago
MetaPilot: genome-aware adaptive search-space refinement for unified DDA and DIA metaproteomics
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Actions for MetaPilot: genome-aware adaptive search-space refinement for unified DDA and DIA metaproteomics
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5d
5 days ago
scIsoAgent enables autonomous isoform-resolved characterization and sequence-informed interpretation of long-read single-cell transcriptomes
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Actions for scIsoAgent enables autonomous isoform-resolved characterization and sequence-informed interpretation of long-read single-cell transcriptomes
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5d
5 days ago
A Transformer-derived transcriptomic score associates with ex-vivo drug response in AML
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Actions for A Transformer-derived transcriptomic score associates with ex-vivo drug response in AML
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5d
5 days ago
Accelerating String Comparison in RLZ Compressed Sequences via LCE Jumps
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Actions for Accelerating String Comparison in RLZ Compressed Sequences via LCE Jumps
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5d
5 days ago
PhenoBIC: operator-free single-cell spatial phenotyping in multiplex imaging data using deep learning of cell staining patterns
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Actions for PhenoBIC: operator-free single-cell spatial phenotyping in multiplex imaging data using deep learning of cell staining patterns
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5d
5 days ago
Super Learner Ensemble Modeling of CPTAC Proteomic Data for Survival Prediction in Head and Neck Squamous Cell Carcinoma
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Actions for Super Learner Ensemble Modeling of CPTAC Proteomic Data for Survival Prediction in Head and Neck Squamous Cell Carcinoma
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5d
5 days ago
DynamicDemiLog: A Single Sketch for Ultrafast Similarity, Frequency, and Cardinality Estimation
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Actions for DynamicDemiLog: A Single Sketch for Ultrafast Similarity, Frequency, and Cardinality Estimation
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5d
5 days ago
Physics-Driven Zero-Shot Reconstruction of Isotropic 3D Fluorescence Microscopy under Undersampled Acquisition
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Actions for Physics-Driven Zero-Shot Reconstruction of Isotropic 3D Fluorescence Microscopy under Undersampled Acquisition
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6d
6 days ago
Expanding gene regulatory networks from transcriptome data through graphical modeling with heterogeneous priors
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Actions for Expanding gene regulatory networks from transcriptome data through graphical modeling with heterogeneous priors
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6d
6 days ago
DAQplugin: Deep Learning based Real-time Model Evaluation Plugin for ChimeraX
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Actions for DAQplugin: Deep Learning based Real-time Model Evaluation Plugin for ChimeraX
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6d
6 days ago
Biological meaning in protein embedding space is resolution-dependent
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Actions for Biological meaning in protein embedding space is resolution-dependent
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6d
6 days ago
Inferring Cell Fate Trajectories in Time-Resolved Metabolic RNA Labeling data
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Actions for Inferring Cell Fate Trajectories in Time-Resolved Metabolic RNA Labeling data
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6d
6 days ago
Multiple Fault Analysis and Drug Therapy on Signaling Pathways Using Dynamic Bayesian Network-based Model
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Actions for Multiple Fault Analysis and Drug Therapy on Signaling Pathways Using Dynamic Bayesian Network-based Model
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6d
6 days ago
oxo-flow: compiled, memory-safe bioinformatics workflow orchestration
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Actions for oxo-flow: compiled, memory-safe bioinformatics workflow orchestration
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6d
6 days ago
AliceDB database and pipeline for identification of natural protein variants based on mass spectrometry measurement data
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Actions for AliceDB database and pipeline for identification of natural protein variants based on mass spectrometry measurement data
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6d
6 days ago
RepGene: Toward a Unified Gene Representation Space Robust to Missing Biological Views
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Actions for RepGene: Toward a Unified Gene Representation Space Robust to Missing Biological Views
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6d
6 days ago
Maternal BMI and Placental Transcriptomic Changes: A Meta-Analysis of Gene Expression at the Maternal-Fetal Interface
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Actions for Maternal BMI and Placental Transcriptomic Changes: A Meta-Analysis of Gene Expression at the Maternal-Fetal Interface
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