biorxiv.org

BGC-QUAST: a quality assessment tool for genome mining software (opens in new tab)

Summary: Biosynthetic gene clusters (BGCs) encode microbial natural products, many of which have important ecological and biomedical roles. Genome mining tools enable large-scale BGC prediction, but their outputs differ substantially, complicating comparison and interpretation. We present BGC-QUAST, a framework for evaluating and comparing BGC predictions across three analysis modes: comparison across samples, assessment of BGC recovery in draft assemblies relative to reference genomes, and c...

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