biorxiv.org

Evaluating open LLMs for agentic analysis orchestration in a typical biomedical lab (opens in new tab)

Agentic tools - software environments where a large language model plans, calls external tools, executes code, and iterates with minimal human intervention - will run a substantial share of routine biomedical data analysis within the next few years. However, per-call inference cost on frontier models is the bottleneck and can add up quickly. Here, we tested whether a free, locally-runnable open-weight model could take over the repetitive execution steps at frontier accuracy. We used Claude's ...

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