Manchester Proteome Profiler: A User-Friendly Platform for Quantitative Proteomic Analysis (opens in new tab)

Manchester Proteome Profiler (MPP) is an open-source R Shiny application that streamlines downstream analysis of quantitative proteomic data. Compatible with grouped protein intensities tables from MaxQuant, FragPipe, Proteome Discoverer and other custom layouts, MPP provides an integrated platform for filtering, normalisation, imputation, differential expression analysis and cluster analysis across user-chosen experimental conditions. MPP supports both single- and dual-dataset comparisons, i...