NANOTAXI: A Shiny-Based GUI for Real-Time Classification and Analysis of 16S rRNA Nanopore Reads (opens in new tab)

Real time taxonomic classification of nanopore amplicon sequencing data enables rapid insights into microbial communities, with applications in clinical diagnostics, environmental monitoring, and outbreak surveillance. However, bridging the gap between long-read data and interpretable results often requires specialised bioinformatics expertise. There remains a need for integrated, user-friendly software that combines live data acquisition with downstream microbiome analysis. Here we present N...