Pathway-centric visualization of cell-cell communication in single-cell transcriptomics data (opens in new tab)

Single-nuclei transcriptomics enables investigating ligand-receptor mediated cell-cell communication between different cell-types. However, current tools do not allow for non-programmatic means to access this analysis. Additionally, most methods can not account for molecular pathways involved in downstream receptor signaling in cell-cell communication. We developed scVizComm, a ShinyApp based web-portal that can be used to interactively visualize ligand-receptor networks across cell-types and...