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bioRxiv: Bioinformatics Preprints
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6w
6 weeks ago
Evaluation of MeaSeq: comprehensive analysis and reporting of measles virus whole genome sequences.
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Actions for Evaluation of MeaSeq: comprehensive analysis and reporting of measles virus whole genome sequences.
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6w
6 weeks ago
A multi-omic, spatial, and whole-slide image dataset of lung neuroendocrine tumours from the lungNENomics cohort
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Actions for A multi-omic, spatial, and whole-slide image dataset of lung neuroendocrine tumours from the lungNENomics cohort
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6w
6 weeks ago
Integrating trajectory inference and gene regulatory network analysis to resolve transcriptional programs of T cell state transitions in the tumor microenvironm...
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Actions for Integrating trajectory inference and gene regulatory network analysis to resolve transcriptional programs of T cell state transitions in the tumor microenvironm...
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6w
6 weeks ago
Integrated RNA-seq analysis identifies ABC transporters mediating taxane export in Taxus species
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Actions for Integrated RNA-seq analysis identifies ABC transporters mediating taxane export in Taxus species
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6w
6 weeks ago
cran2crux: automatically create CRUX ports for R-packages
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Actions for cran2crux: automatically create CRUX ports for R-packages
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6 weeks ago
Redesign selective protein binders using contrastive decoding
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Actions for Redesign selective protein binders using contrastive decoding
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6w
6 weeks ago
De novo protein discovery in non-model organisms
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Actions for De novo protein discovery in non-model organisms
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6w
6 weeks ago
A chemoinformatics-guided platform for efficient discovery of RNA-binding small molecules: Proof-of-concept for myotonic dystrophy type 1
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Actions for A chemoinformatics-guided platform for efficient discovery of RNA-binding small molecules: Proof-of-concept for myotonic dystrophy type 1
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6w
6 weeks ago
xNNPCD identifies regulators of programmed cell death by integrating perturbation transcriptomes with cancer dependency profiles
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Actions for xNNPCD identifies regulators of programmed cell death by integrating perturbation transcriptomes with cancer dependency profiles
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6w
6 weeks ago
Preferential IsomiR Enrichment in Extracellular Vesicles Improves Identification of Their Cellular Origins
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Actions for Preferential IsomiR Enrichment in Extracellular Vesicles Improves Identification of Their Cellular Origins
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6w
6 weeks ago
Metagenomics-enabled proteomics reveals how AMF and PSB co-inoculation reshapes tomato rhizosphere dynamics across growth stages
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Actions for Metagenomics-enabled proteomics reveals how AMF and PSB co-inoculation reshapes tomato rhizosphere dynamics across growth stages
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6w
6 weeks ago
HAIRpred2: Human Host-Specific Prediction of Antibody-Interacting Residues Using Hybrid Physicochemical and Structural Features
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Actions for HAIRpred2: Human Host-Specific Prediction of Antibody-Interacting Residues Using Hybrid Physicochemical and Structural Features
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6w
6 weeks ago
Systematic Regional Bias is Widespread in ChIP-seq
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Actions for Systematic Regional Bias is Widespread in ChIP-seq
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6w
6 weeks ago
An assessment of normalization and differential expression methods for miRNA-seq analysis using a realistic benchmark dataset
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Actions for An assessment of normalization and differential expression methods for miRNA-seq analysis using a realistic benchmark dataset
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6w
6 weeks ago
Transferable spatial omics deconvolution with SpaRank
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Actions for Transferable spatial omics deconvolution with SpaRank
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6w
6 weeks ago
Cell-Level Virtual Screening
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Actions for Cell-Level Virtual Screening
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6 weeks ago
BiLSTM-Powered Bilinear Attention for Protein-Ligand Prediction
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Actions for BiLSTM-Powered Bilinear Attention for Protein-Ligand Prediction
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6 weeks ago
Cell Type-informed Characterization of Spatial Niches from Spatial Multimodal and Multi-omics Data
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Actions for Cell Type-informed Characterization of Spatial Niches from Spatial Multimodal and Multi-omics Data
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6 weeks ago
Disagreement between demultiplexing methods reveals structured cell quality gradients in multiplexed single-cell data
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Actions for Disagreement between demultiplexing methods reveals structured cell quality gradients in multiplexed single-cell data
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6 weeks ago
Bayesian-Steered Structure Prediction of Mechanical Biomolecules Using Twisted Diffusion
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Actions for Bayesian-Steered Structure Prediction of Mechanical Biomolecules Using Twisted Diffusion
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